Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12256 and 12257 are separated by 210 nucleotides12257 and 12258 are separated by 412 nucleotides12258 and 12259 are separated by 215 nucleotides12259 and 12260 are separated by 1456 nucleotides mRNA_3888: 12256 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 829,400 to 831,173 12256 mRNA_3889: 12257 - K00587 ICMT, STE14 protein-S-isoprenylcysteine O-methyltransferase, at 831,384 to 832,562 12257 mRNA_3890: 12258 - HMMPfam-Pal1 cell morphology protein-PF08316, at 832,975 to 835,014 12258 mRNA_3891: 12259 - K07889 RAB5C Ras-related protein Rab-5C, at 835,230 to 836,530 12259 mRNA_3892: 12260 - Hypothetical Protein, at 837,987 to 839,368 12260
Group Condition mRNA_3888 mRNA_3889 mRNA_3890 mRNA_3891 mRNA_3892
12256 12257 12258 12259 12260
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.4 +0.8 -2.1 +0.4
growth on ypd YPD +0.1 -1.1 -0.0 -0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -1.1 +0.0 -1.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -1.0 +1.1 -1.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 -0.3 -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.8 +0.0 -0.9 +0.5
growth on oleic acid YNB Glucose -0.3 -0.0 +0.5 -1.3 +0.2
growth on ricinoleic acid YNB Glucose -0.1 -1.0 +0.7 -0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 -0.1 -0.7 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.6 -0.5 +1.5 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.0 -0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.0 +0.1 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.0 +0.9 -0.7 +0.1
auxotrophy YNB Glucose +0.1 -0.4 +1.0 -0.5 +0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.4 +0.7 -0.5 +0.2
auxotrophy Dropout Complete +0.1 -0.1 +0.9 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.4 +0.3 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.0 +0.9 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.2 +0.8 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.4 -0.3 +0.7 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 +1.0 +0.5 +0.1
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