Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12257 and 12258 are separated by 412 nucleotides12258 and 12259 are separated by 215 nucleotides12259 and 12260 are separated by 1456 nucleotides12260 and 12261 are separated by 270 nucleotides mRNA_3889: 12257 - K00587 ICMT, STE14 protein-S-isoprenylcysteine O-methyltransferase, at 831,384 to 832,562 12257 mRNA_3890: 12258 - HMMPfam-Pal1 cell morphology protein-PF08316, at 832,975 to 835,014 12258 mRNA_3891: 12259 - K07889 RAB5C Ras-related protein Rab-5C, at 835,230 to 836,530 12259 mRNA_3892: 12260 - Hypothetical Protein, at 837,987 to 839,368 12260 mRNA_3893: 12261 - K07375 TUBB tubulin beta, at 839,639 to 842,065 12261
Group Condition mRNA_3889 mRNA_3890 mRNA_3891 mRNA_3892 mRNA_3893
12257 12258 12259 12260 12261
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 +0.8 -2.1 +0.4 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.0 -1.0 -0.0 -0.0
growth on ypd YPD -1.1 -0.0 -0.7 -0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 +1.1 -1.3 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.0 -0.9 +0.5 +0.2
growth on ricinoleic acid YNB Glucose -1.0 +0.7 -0.5 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 -0.5 -0.1 +0.2
growth on oleic acid YNB Glucose -0.0 +0.5 -1.3 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.1 -0.7 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 -0.4 +0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.5 +1.5 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.1 -0.3 -0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.9 -0.7 +0.1 +0.0
auxotrophy YNB Glucose -0.4 +1.0 -0.5 +0.2 +0.1
auxotrophy Dropout Complete -0.1 +0.9 -0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.3 -0.3 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.4 +0.7 -0.5 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 +0.9 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.3 +0.7 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.8 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +1.0 +0.5 +0.1 +0.1
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