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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12260 and 12261 are separated by 270 nucleotides
12261 and 12262 are separated by 383 nucleotides
12262 and 12263 are separated by 551 nucleotides
12263 and 12264 are separated by 125 nucleotides
mRNA_3892: 12260 - Hypothetical Protein, at 837,987 to 839,368
12260
mRNA_3893: 12261 - K07375 TUBB tubulin beta, at 839,639 to 842,065
12261
mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842,449 to 843,578
12262
mRNA_3895: 12263 - Hypothetical Protein, at 844,130 to 844,681
12263
mRNA_3896: 12264 - BLAST F-box domain containing protein [Metarhizium maju..., at 844,807 to 845,932
12264
Group
Condition
mRNA
_3892
mRNA
_3893
mRNA
_3894
mRNA
_3895
mRNA
_3896
12260
12261
12262
12263
12264
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.0
-1.5
-0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
+0.2
-1.1
-0.1
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
-1.2
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.1
-0.6
-0.2
-0.4
auxotrophy
Dropout Complete
+0.2
-0.1
-0.7
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.2
-0.1
+0.1
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
-0.9
+0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
+0.2
+0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.0
+0.2
+0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
-0.1
+0.2
-0.3
growth on ypd
YPD
-0.2
+0.4
+0.3
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
-0.3
+0.2
-0.3
auxotrophy
YNB Glucose
+0.2
+0.1
-0.0
+0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
+0.2
-0.3
+0.4
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
+0.2
-0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.1
+0.1
+0.1
-0.2
growth on oleic acid
YNB Glucose
+0.2
-0.0
+0.4
+0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.1
+0.2
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.0
-0.0
+0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
+1.0
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.3
+1.0
+0.6
+0.2
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