Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12263 and 12264 are separated by 125 nucleotides12264 and 12265 are separated by 172 nucleotides12265 and 12266 are separated by 787 nucleotides12266 and 12267 are separated by 331 nucleotides mRNA_3895: 12263 - Hypothetical Protein, at 844,130 to 844,681 12263 mRNA_3896: 12264 - BLAST F-box domain containing protein [Metarhizium maju..., at 844,807 to 845,932 12264 mRNA_3897: 12265 - K00459 ncd2, npd nitronate monooxygenase, at 846,105 to 847,395 12265 mRNA_3898: 12266 - HMMPfam-Acetyltransferase (GNAT) domain-PF13508,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 848,183 to 849,090 12266 mRNA_3899: 12267 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 849,422 to 850,420 12267
Group Condition mRNA_3895 mRNA_3896 mRNA_3897 mRNA_3898 mRNA_3899
12263 12264 12265 12266 12267
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.2 -4.2 +0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 +0.8 +0.2 -3.1
auxotrophy YNB Glucose +0.2 -0.5 -0.3 -1.0 -0.8
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.3 -0.3 -1.0 -0.4
auxotrophy Dropout Complete +0.1 -0.1 +0.2 -0.5 -0.8
growth on ricinoleic acid YNB Glucose +0.0 -0.5 +0.1 +0.8 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.6 -0.7 -0.1 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 +0.2 -0.5 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 +0.0 +0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.0 +0.4 +0.5 -0.4
growth on ypd YPD -0.5 -0.1 -0.3 +0.8 +0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.3 +0.5 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.1 +0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.7 +0.7 +0.7 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 +0.4 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.1 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.1 +0.5 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 +0.5 +0.6 -0.8
growth on oleic acid YNB Glucose +0.0 -0.1 +0.9 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 +0.8 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.2 +0.1 +0.3 +0.7
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