Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12265 and 12266 are separated by 787 nucleotides12266 and 12267 are separated by 331 nucleotides12267 and 12268 are separated by 177 nucleotides12268 and 12269 are separated by 587 nucleotides mRNA_3897: 12265 - K00459 ncd2, npd nitronate monooxygenase, at 846,105 to 847,395 12265 mRNA_3898: 12266 - HMMPfam-Acetyltransferase (GNAT) domain-PF13508,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 848,183 to 849,090 12266 mRNA_3899: 12267 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 849,422 to 850,420 12267 mRNA_3900: 12268 - SUPERFAMILY--SSF55729, at 850,598 to 851,508 12268 mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852,096 to 854,470 12269
Group Condition mRNA_3897 mRNA_3898 mRNA_3899 mRNA_3900 mRNA_3901
12265 12266 12267 12268 12269
ypd buoyancy 40 hrs No Buoyancy Separation -4.2 +0.2 -0.5 +0.6 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.8 +0.2 -3.1 -0.6 +0.1
auxotrophy YNB Glucose -0.3 -1.0 -0.8 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -1.0 -0.4 -0.3 +0.2
auxotrophy Dropout Complete +0.2 -0.5 -0.8 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.5 -0.3 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.6 -0.8 -0.5 -0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.8 -1.3 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.5 +0.2 -0.2 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.5 -0.4 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 +0.6 +0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 -0.3 +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 -0.3 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.3 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +0.7 -0.6 +0.0 -0.1
growth on ypd YPD -0.3 +0.8 +0.3 +0.0 +0.1
growth on oleic acid YNB Glucose +0.9 +0.5 +0.2 -0.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.5 +0.3 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 +0.7 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 +0.6 +0.1 +0.5 +0.1
remove
mRNA_3897
plot
remove
mRNA_3898
plot
remove
mRNA_3899
remove
mRNA_3900
plot
remove
mRNA_3901
plot