Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12269 and 12270 are separated by 663 nucleotides
12270 and 12271 are separated by 296 nucleotides
12271 and 12272 are separated by 49 nucleotides
12272 and 12273 are separated by 619 nucleotides
mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852,096 to 854,470
12269
mRNA_3902: 12270 - K12471 EPN epsin, at 855,134 to 857,273
12270
mRNA_3903: 12271 - K01273 DPEP membrane dipeptidase, at 857,570 to 859,111
12271
mRNA_3904: 12272 - KOG1176 Acyl-CoA synthetase, at 859,161 to 861,426
12272
mRNA_3905: 12273 - KOG0118 FOG RRM domain, at 862,046 to 863,996
12273
Group
Condition
mRNA
_3901
mRNA
_3902
mRNA
_3903
mRNA
_3904
mRNA
_3905
12269
12270
12271
12272
12273
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
+0.3
+0.0
-1.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
-0.2
+0.0
-1.4
growth on oleic acid
YNB Glucose
-0.6
N.D.
-0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
-0.3
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
-0.2
-0.2
-0.4
auxotrophy
YNB Glucose
+0.2
N.D.
-0.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
N.D.
-0.5
+0.0
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
N.D.
-0.2
+0.2
-0.7
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
-0.2
-0.3
+0.3
auxotrophy
Dropout Complete
+0.1
N.D.
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
-0.3
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
-0.2
-0.5
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
N.D.
-0.3
-0.4
+0.8
growth on ypd
YPD
+0.1
N.D.
+0.0
+0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.2
+0.0
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
-0.2
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
+0.1
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-0.2
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
+0.2
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.4
+0.3
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
-0.2
+0.1
+1.1
remove
mRNA_3901
plot
remove
mRNA_3902
plot
remove
mRNA_3903
remove
mRNA_3904
plot
remove
mRNA_3905
plot