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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12272 and 12273 are separated by 619 nucleotides
12273 and 12274 are separated by 1749 nucleotides
12274 and 12275 are separated by 258 nucleotides
12275 and 12276 are separated by 366 nucleotides
mRNA_3904: 12272 - KOG1176 Acyl-CoA synthetase, at 859,161 to 861,426
12272
mRNA_3905: 12273 - KOG0118 FOG RRM domain, at 862,046 to 863,996
12273
mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865,746 to 868,815
12274
mRNA_3907: 12275 - Hypothetical Protein, at 869,074 to 869,751
12275
mRNA_3908: 12276 - Interpro Protein of unknown function (DUF2945), at 870,118 to 872,012
12276
Group
Condition
mRNA
_3904
mRNA
_3905
mRNA
_3906
mRNA
_3907
mRNA
_3908
12272
12273
12274
12275
12276
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.2
-0.2
-1.9
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-1.9
+0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-1.4
+0.3
-0.9
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.3
-0.3
-1.5
+0.0
growth on oleic acid
YNB Glucose
-0.2
-0.2
+0.1
-1.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.4
+0.3
-0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.5
-0.5
-0.5
+0.0
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-0.3
-0.4
+0.2
auxotrophy
Dropout Complete
-0.1
-0.1
-0.1
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.1
+0.1
-0.5
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.7
+0.4
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.0
-0.0
-0.7
+0.0
auxotrophy
YNB Glucose
-0.1
-0.2
+0.1
-0.5
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.1
-0.3
+0.1
growth on ypd
YPD
+0.1
-0.3
-0.0
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.6
+0.2
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.1
-0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+1.1
+0.3
-1.0
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.7
+0.5
+0.6
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.8
-0.4
+0.9
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
+0.5
+0.7
+0.2
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