Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12273 and 12274 are separated by 1749 nucleotides12274 and 12275 are separated by 258 nucleotides12275 and 12276 are separated by 366 nucleotides12276 and 12277 are separated by 100 nucleotides mRNA_3905: 12273 - KOG0118 FOG RRM domain, at 862,046 to 863,996 12273 mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865,746 to 868,815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869,074 to 869,751 12275 mRNA_3908: 12276 - Interpro Protein of unknown function (DUF2945), at 870,118 to 872,012 12276 mRNA_3909: 12277 - K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1, at 872,113 to 873,418 12277
Group Condition mRNA_3905 mRNA_3906 mRNA_3907 mRNA_3908 mRNA_3909
12273 12274 12275 12276 12277
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 -1.9 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 +0.3 -0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4 +0.3 -0.9 +0.1 +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.7 +0.4 -0.5 -0.0 -0.3
growth on oleic acid YNB Oleic Acid +0.3 -0.3 -1.5 +0.0 +0.2
growth on oleic acid YNB Glucose -0.2 +0.1 -1.0 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.3 -0.6 -0.1 +0.1
auxotrophy Dropout Complete -0.1 -0.1 -0.3 -0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.3 -0.4 +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.5 -0.5 +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.5 -0.1 +0.4
auxotrophy YNB Glucose -0.2 +0.1 -0.5 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.3 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 -0.7 +0.0 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.6 +0.2 +0.1 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.2 +0.0 +0.1
growth on ypd YPD -0.3 -0.0 +0.2 -0.1 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.5 +0.6 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.1 +0.3 -1.0 +0.1 +0.9
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 -0.4 +0.9 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.5 +0.7 +0.2 +0.7
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