Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12274 and 12275 are separated by 258 nucleotides12275 and 12276 are separated by 366 nucleotides12276 and 12277 are separated by 100 nucleotides12277 and 12278 are separated by 790 nucleotides mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865,746 to 868,815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869,074 to 869,751 12275 mRNA_3908: 12276 - Interpro Protein of unknown function (DUF2945), at 870,118 to 872,012 12276 mRNA_3909: 12277 - K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1, at 872,113 to 873,418 12277 mRNA_3910: 12278 - KOG0587 Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases, at 874,209 to 878,555 12278
Group Condition mRNA_3906 mRNA_3907 mRNA_3908 mRNA_3909 mRNA_3910
12274 12275 12276 12277 12278
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -1.9 -0.1 -0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.3 -1.5 +0.0 +0.2 -0.1
growth on oleic acid YNB Glucose +0.1 -1.0 -0.1 +0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.5 +0.0 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.5 -0.0 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.6 -0.1 +0.1 -0.4
auxotrophy Dropout Complete -0.1 -0.3 -0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.5 -0.1 +0.4 -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.4 +0.2 +0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.3 -0.1 -0.2 +0.2
auxotrophy YNB Glucose +0.1 -0.5 +0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.7 +0.0 +0.6 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 +0.1 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.9 +0.1 +0.7 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 +0.0 +0.1 +0.0
growth on ypd YPD -0.0 +0.2 -0.1 +0.7 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -1.0 +0.1 +0.9 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.1 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.9 +0.2 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.6 +0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.7 +0.2 +0.7 +0.3
remove
mRNA_3906
plot
remove
mRNA_3907
plot
remove
mRNA_3908
remove
mRNA_3909
plot
remove
mRNA_3910
plot