Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12282 and 12283 are separated by 222 nucleotides12283 and 12284 are separated by 124 nucleotides12284 and 12285 are separated by 144 nucleotides12285 and 12286 are separated by 591 nucleotides mRNA_3914: 12282 - HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350, at 886,816 to 890,417 12282 mRNA_3915: 12283 - K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase, at 890,640 to 892,402 12283 mRNA_3916: 12284 - K02736 PSMB4 20S proteasome subunit beta 7, at 892,527 to 893,886 12284 mRNA_3917: 12285 - KOG4479 Transcription factor e(y)2, at 894,031 to 894,594 12285 mRNA_3918: 12286 - KOG0024 Sorbitol dehydrogenase, at 895,186 to 897,368 12286
Group Condition mRNA_3914 mRNA_3915 mRNA_3916 mRNA_3917 mRNA_3918
12282 12283 12284 12285 12286
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 N.D. -1.3 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.8 N.D. -0.6 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -1.0 N.D. +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 N.D. -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.4 N.D. -0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.5 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 N.D. -0.0 +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 N.D. -0.2 +0.2
growth on ypd YPD +0.2 +0.7 N.D. -0.6 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 N.D. +0.5 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 N.D. +0.6 -0.4
growth on oleic acid YNB Glucose +0.0 -0.4 N.D. +0.6 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.7 N.D. -1.0 +0.4
auxotrophy YNB Glucose -0.3 +0.1 N.D. +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 N.D. +0.6 +0.1
auxotrophy Dropout Complete -0.5 -0.4 N.D. +1.0 +0.4
growth on oleic acid YNB Oleic Acid +0.0 -0.2 N.D. +0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. +0.7 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.2 N.D. +1.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 N.D. +1.0 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.3 N.D. +1.1 +0.4
remove
mRNA_3914
plot
remove
mRNA_3915
plot
remove
mRNA_3916
remove
mRNA_3917
plot
remove
mRNA_3918
plot