Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12285 and 12286 are separated by 591 nucleotides12286 and 12287 are separated by 518 nucleotides12287 and 12288 are separated by 330 nucleotides12288 and 12289 are separated by 1294 nucleotides mRNA_3917: 12285 - KOG4479 Transcription factor e(y)2, at 894,031 to 894,594 12285 mRNA_3918: 12286 - KOG0024 Sorbitol dehydrogenase, at 895,186 to 897,368 12286 mRNA_3919: 12287 - KOG4020 Protein DRE2, required for cell viability, at 897,887 to 899,209 12287 mRNA_3920: 12288 - K12767 RIM15 serine/threonine-protein kinase RIM15, at 899,540 to 908,734 12288 mRNA_3921: 12289 - Hypothetical Protein, at 910,029 to 911,741 12289
Group Condition mRNA_3917 mRNA_3918 mRNA_3919 mRNA_3920 mRNA_3921
12285 12286 12287 12288 12289
facs on lipid accumulation Sorted High BODIPY Gate -1.3 -0.9 N.D. -1.7 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.1 N.D. -1.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.5 N.D. -0.1 -0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 N.D. -1.2 -0.2
growth on ypd YPD -0.6 -0.3 N.D. -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.4 N.D. +0.0 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.3 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 N.D. -0.4 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.4 N.D. +0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.2 N.D. +0.1 -0.3
auxotrophy YNB Glucose +0.3 +0.3 N.D. +0.3 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.4 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.0 +0.0 N.D. +0.0 -0.6
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.0 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.7 +0.1 N.D. +0.0 -0.3
growth on oleic acid YNB Glucose +0.6 -0.0 N.D. +0.0 +0.7
auxotrophy YNB Glucose 75mM Methionine +1.2 +0.5 N.D. +0.2 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.1 N.D. +0.2 +0.3
auxotrophy Dropout Complete +1.0 +0.4 N.D. +0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +1.1 +0.4 N.D. +0.2 -0.2
growth on oleic acid YNB Oleic Acid +0.2 +0.6 N.D. +0.5 +0.5
remove
mRNA_3917
plot
remove
mRNA_3918
plot
remove
mRNA_3919
remove
mRNA_3920
plot
remove
mRNA_3921
plot