Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12288 and 12289 are separated by 1294 nucleotides12289 and 12290 are separated by 442 nucleotides12290 and 12291 are separated by 282 nucleotides12291 and 12292 are separated by 254 nucleotides mRNA_3920: 12288 - K12767 RIM15 serine/threonine-protein kinase RIM15, at 899,540 to 908,734 12288 mRNA_3921: 12289 - Hypothetical Protein, at 910,029 to 911,741 12289 mRNA_3922: 12290 - K11099 SNRPG, SMG small nuclear ribonucleoprotein G, at 912,184 to 912,720 12290 mRNA_3923: 12291 - K01465 URA4, pyrC dihydroorotase, at 913,003 to 914,315 12291 mRNA_3924: 12292 - KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily), at 914,570 to 918,595 12292
Group Condition mRNA_3920 mRNA_3921 mRNA_3922 mRNA_3923 mRNA_3924
12288 12289 12290 12291 12292
facs on lipid accumulation Sorted High BODIPY Gate -1.7 +0.3 N.D. N.D. -2.5
facs on lipid accumulation Sorted No BODIPY Gate -1.2 -0.2 N.D. N.D. -2.1
auxotrophy YNB Glucose +0.3 -0.8 N.D. N.D. -2.5
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.6 N.D. N.D. -2.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.8 N.D. N.D. -1.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 N.D. N.D. -1.9
auxotrophy Dropout Complete +0.3 -0.3 N.D. N.D. -2.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.3 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.6 N.D. N.D. -1.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.8 N.D. N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 N.D. N.D. -1.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 N.D. N.D. -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 N.D. N.D. -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.0 N.D. N.D. -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.3 N.D. N.D. -0.4
growth on oleic acid YNB Oleic Acid +0.5 +0.5 N.D. N.D. -1.6
growth on ricinoleic acid YNB Glucose +0.1 -0.3 N.D. N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.1 N.D. N.D. -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.3 N.D. N.D. -0.4
growth on oleic acid YNB Glucose +0.0 +0.7 N.D. N.D. -0.5
growth on ypd YPD -0.1 -0.1 N.D. N.D. +1.1
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