Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12289 and 12290 are separated by 442 nucleotides12290 and 12291 are separated by 282 nucleotides12291 and 12292 are separated by 254 nucleotides12292 and 12293 are separated by 157 nucleotides mRNA_3921: 12289 - Hypothetical Protein, at 910,029 to 911,741 12289 mRNA_3922: 12290 - K11099 SNRPG, SMG small nuclear ribonucleoprotein G, at 912,184 to 912,720 12290 mRNA_3923: 12291 - K01465 URA4, pyrC dihydroorotase, at 913,003 to 914,315 12291 mRNA_3924: 12292 - KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily), at 914,570 to 918,595 12292 mRNA_3925: 12293 - Hypothetical Protein, at 918,753 to 919,544 12293
Group Condition mRNA_3921 mRNA_3922 mRNA_3923 mRNA_3924 mRNA_3925
12289 12290 12291 12292 12293
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 N.D. N.D. -1.6 -1.0
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. N.D. -2.2 -0.1
auxotrophy YNB Glucose -0.8 N.D. N.D. -2.5 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. N.D. -1.0 -0.7
auxotrophy Dropout Complete -0.3 N.D. N.D. -2.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. -1.9 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. N.D. -2.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. -2.5 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -1.0 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.8 N.D. N.D. -0.6 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. N.D. -1.2 +0.4
growth on oleic acid YNB Oleic Acid +0.5 N.D. N.D. -1.6 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. -1.0 +0.2
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. N.D. -1.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. N.D. -0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. N.D. -0.4 +0.2
growth on oleic acid YNB Glucose +0.7 N.D. N.D. -0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. N.D. -0.5 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. N.D. -0.4 +0.6
growth on ypd YPD -0.1 N.D. N.D. +1.1 +0.2
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