Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12290 and 12291 are separated by 282 nucleotides12291 and 12292 are separated by 254 nucleotides12292 and 12293 are separated by 157 nucleotides12293 and 12294 are separated by 319 nucleotides mRNA_3922: 12290 - K11099 SNRPG, SMG small nuclear ribonucleoprotein G, at 912,184 to 912,720 12290 mRNA_3923: 12291 - K01465 URA4, pyrC dihydroorotase, at 913,003 to 914,315 12291 mRNA_3924: 12292 - KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily), at 914,570 to 918,595 12292 mRNA_3925: 12293 - Hypothetical Protein, at 918,753 to 919,544 12293 mRNA_3926: 12294 - HMMPfam-ER protein Pkr1-PF08636, at 919,864 to 921,279 12294
Group Condition mRNA_3922 mRNA_3923 mRNA_3924 mRNA_3925 mRNA_3926
12290 12291 12292 12293 12294
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -1.6 -1.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -2.5 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -2.1 +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -2.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -1.0 -0.7 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.9 -0.1 +0.3
auxotrophy YNB Glucose N.D. N.D. -2.5 +0.5 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.0 -0.8 +0.5
auxotrophy Dropout Complete N.D. N.D. -2.2 +0.3 +0.7
growth on oleic acid YNB Oleic Acid N.D. N.D. -1.6 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -1.0 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -1.0 +0.2 +0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.5 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.4 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -1.2 +0.4 +0.4
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.4 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.6 +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.5 +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.4 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.4 +0.6 -0.0
growth on ypd YPD N.D. N.D. +1.1 +0.2 -0.1
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