Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12292 and 12293 are separated by 157 nucleotides12293 and 12294 are separated by 319 nucleotides12294 and 12295 are separated by 157 nucleotides12295 and 12296 are separated by 225 nucleotides mRNA_3924: 12292 - KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily), at 914,570 to 918,595 12292 mRNA_3925: 12293 - Hypothetical Protein, at 918,753 to 919,544 12293 mRNA_3926: 12294 - HMMPfam-ER protein Pkr1-PF08636, at 919,864 to 921,279 12294 mRNA_3927: 12295 - K10734 GINS3 GINS complex subunit 3, at 921,437 to 922,417 12295 mRNA_3928: 12296 - HMMPfam-Fungalysin metallopeptidase (M36)-PF02128,HMMPfam-Fungalysin/Thermolysin Propeptide Motif-PF07504,PRINTS-Fungalysin metallopeptidase (M36) signature-PR00999,SUPERFAMILY--SSF55486, at 922,643 to 925,532 12296
Group Condition mRNA_3924 mRNA_3925 mRNA_3926 mRNA_3927 mRNA_3928
12292 12293 12294 12295 12296
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.6 -1.0 -0.1 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine -2.2 -0.1 +0.4 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -2.5 +0.3 -0.2 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate -2.1 +0.3 -0.1 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.9 -0.1 +0.3 N.D. +0.0
auxotrophy YNB Glucose -2.5 +0.5 +0.4 N.D. +0.0
auxotrophy Dropout Complete -2.2 +0.3 +0.7 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.7 -0.0 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.8 +0.5 N.D. +0.1
growth on oleic acid YNB Oleic Acid -1.6 +0.1 +0.4 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -1.0 +0.2 +0.1 N.D. -0.0
growth on oleic acid YNB Glucose -0.5 -0.3 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 +0.1 -0.0 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -1.2 +0.4 +0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.3 +0.1 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.3 +0.0 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.3 +0.1 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.4 -0.1 +0.3 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.2 +0.1 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.6 -0.0 N.D. +0.1
growth on ypd YPD +1.1 +0.2 -0.1 N.D. +0.0
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