Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12295 and 12296 are separated by 225 nucleotides12296 and 12297 are separated by 211 nucleotides12297 and 12298 are separated by 366 nucleotides12298 and 12299 are separated by 462 nucleotides mRNA_3927: 12295 - K10734 GINS3 GINS complex subunit 3, at 921,437 to 922,417 12295 mRNA_3928: 12296 - HMMPfam-Fungalysin metallopeptidase (M36)-PF02128,HMMPfam-Fungalysin/Thermolysin Propeptide Motif-PF07504,PRINTS-Fungalysin metallopeptidase (M36) signature-PR00999,SUPERFAMILY--SSF55486, at 922,643 to 925,532 12296 mRNA_3929: 12297 - BLAST TKL/TKL-ccin protein kinase [Mycena chlorophos], at 925,744 to 929,341 12297 mRNA_3930: 12298 - Hypothetical Protein, at 929,708 to 931,043 12298 mRNA_3931: 12299 - BLAST protein [Lichtheimia corymbifera JMRC-FSU-9682], at 931,506 to 935,642 12299
Group Condition mRNA_3927 mRNA_3928 mRNA_3929 mRNA_3930 mRNA_3931
12295 12296 12297 12298 12299
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 -0.6 -0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.2 -0.2 -0.1
growth on ypd YPD N.D. +0.0 -0.1 -0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.1 -0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.1 -0.3 +0.2
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.3 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.0 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.0 -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.0 +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.0 -0.5 +0.5
auxotrophy Dropout Complete N.D. -0.2 +0.1 -0.5 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.2 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 +0.1 -0.2 +0.2
growth on oleic acid YNB Glucose N.D. -0.1 +0.1 +0.2 +0.3
auxotrophy YNB Glucose N.D. +0.0 +0.1 -0.1 +0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.1 -0.0 +0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 -0.1 +0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.5 -0.2 +1.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.2 -0.1 +1.6
growth on oleic acid YNB Oleic Acid N.D. +0.2 -0.0 +0.2 +1.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.5 -0.2 +0.7 +0.7
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