Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12300 and 12301 are separated by 136 nucleotides12301 and 12302 are separated by 1228 nucleotides12302 and 12303 are separated by 518 nucleotides12303 and 12304 are separated by 464 nucleotides mRNA_3932: 12300 - K18532 AK6, FAP7 adenylate kinase, at 935,952 to 936,713 12300 mRNA_3933: 12301 - Hypothetical Protein, at 936,850 to 939,133 12301 mRNA_3934: 12302 - K01955 carB, CPA2 carbamoyl-phosphate synthase large subunit, at 940,362 to 944,260 12302 mRNA_3935: 12303 - HMMPfam-ER protein Pkr1-PF08636, at 944,779 to 945,196 12303 mRNA_3936: 12304 - Hypothetical Protein, at 945,661 to 946,219 12304
Group Condition mRNA_3932 mRNA_3933 mRNA_3934 mRNA_3935 mRNA_3936
12300 12301 12302 12303 12304
growth on oleic acid YNB Glucose N.D. -0.4 -4.8 -0.1 -0.4
auxotrophy YNB Glucose N.D. +0.5 -5.3 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -5.1 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -4.7 -0.3 -0.3
growth on ricinoleic acid YNB Glucose N.D. +0.1 -5.0 -0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -5.0 +0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 -5.0 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.6 -5.3 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -3.9 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -4.1 +0.6 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 -3.5 -0.2 -0.0
growth on oleic acid YNB Oleic Acid N.D. -0.1 -3.2 -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -3.7 +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 -2.3 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.6 -0.2 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 +0.1 +0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.1 +0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 +0.3 +0.3 +0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.3 +0.7 +0.1
growth on ypd YPD N.D. +0.7 +0.1 +0.1 -0.3
auxotrophy Dropout Complete N.D. +0.4 +0.1 -0.3 +0.3
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