Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12303 and 12304 are separated by 464 nucleotides12304 and 12305 are separated by 151 nucleotides12305 and 12306 are separated by 167 nucleotides12306 and 12307 are separated by 334 nucleotides mRNA_3935: 12303 - HMMPfam-ER protein Pkr1-PF08636, at 944,779 to 945,196 12303 mRNA_3936: 12304 - Hypothetical Protein, at 945,661 to 946,219 12304 mRNA_3937: 12305 - KOG0692 Pentafunctional AROM protein, at 946,371 to 947,832 12305 mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948,000 to 949,684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950,019 to 951,719 12307
Group Condition mRNA_3935 mRNA_3936 mRNA_3937 mRNA_3938 mRNA_3939
12303 12304 12305 12306 12307
auxotrophy YNB Glucose -0.7 -0.1 +0.1 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.4 -0.2 -0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.3 -0.0 +0.0 -0.5 -0.3
growth on oleic acid YNB Glucose -0.1 -0.4 +0.0 -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.3 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -0.3 -0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 -0.0 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.5 -0.5 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.0 +0.1 -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 -0.3 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 -0.1 +0.1 -0.4
auxotrophy Dropout Complete -0.3 +0.3 -0.2 -0.5 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 -0.1 +0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.1 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -0.2 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 +0.2 -0.3 +0.1
growth on ypd YPD +0.1 -0.3 +0.6 -0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.1 +0.2 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.7 +0.1 -0.0 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.1 +0.3 +0.0 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.6 +0.3 +0.4 +0.6
remove
mRNA_3935
plot
remove
mRNA_3936
plot
remove
mRNA_3937
remove
mRNA_3938
plot
remove
mRNA_3939
plot