Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12304 and 12305 are separated by 151 nucleotides12305 and 12306 are separated by 167 nucleotides12306 and 12307 are separated by 334 nucleotides12307 and 12308 are separated by 429 nucleotides mRNA_3936: 12304 - Hypothetical Protein, at 945,661 to 946,219 12304 mRNA_3937: 12305 - KOG0692 Pentafunctional AROM protein, at 946,371 to 947,832 12305 mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948,000 to 949,684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950,019 to 951,719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952,149 to 952,942 12308
Group Condition mRNA_3936 mRNA_3937 mRNA_3938 mRNA_3939 mRNA_3940
12304 12305 12306 12307 12308
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.5 +0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 -0.1 -0.3 N.D.
growth on oleic acid YNB Glucose -0.4 +0.0 -0.1 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.0 -0.5 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 -0.3 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 -0.4 +0.2 N.D.
auxotrophy YNB Glucose -0.1 +0.1 -0.3 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.2 -0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 -0.4 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 +0.1 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 +0.2 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 -0.1 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.1 -0.3 N.D.
auxotrophy Dropout Complete +0.3 -0.2 -0.5 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 +0.0 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 -0.3 +0.1 N.D.
growth on ypd YPD -0.3 +0.6 -0.4 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 -0.2 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 +0.0 +0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.3 +0.4 +0.6 N.D.
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