Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12305 and 12306 are separated by 167 nucleotides12306 and 12307 are separated by 334 nucleotides12307 and 12308 are separated by 429 nucleotides12308 and 12309 are separated by 168 nucleotides mRNA_3937: 12305 - KOG0692 Pentafunctional AROM protein, at 946,371 to 947,832 12305 mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948,000 to 949,684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950,019 to 951,719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952,149 to 952,942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953,111 to 953,710 12309
Group Condition mRNA_3937 mRNA_3938 mRNA_3939 mRNA_3940 mRNA_3941
12305 12306 12307 12308 12309
growth on ricinoleic acid YNB Glucose +0.0 -0.5 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.1 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 -0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 -0.0 N.D. N.D.
auxotrophy YNB Glucose +0.1 -0.3 -0.4 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.4 -0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.3 N.D. N.D.
auxotrophy Dropout Complete -0.2 -0.5 +0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.1 N.D. N.D.
growth on oleic acid YNB Glucose +0.0 -0.1 -0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 -0.4 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.3 +0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 +0.0 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.0 +0.1 N.D. N.D.
growth on ypd YPD +0.6 -0.4 +0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 +0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.4 +0.6 N.D. N.D.
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