Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12306 and 12307 are separated by 334 nucleotides12307 and 12308 are separated by 429 nucleotides12308 and 12309 are separated by 168 nucleotides12309 and 12310 are separated by 374 nucleotides mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948,000 to 949,684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950,019 to 951,719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952,149 to 952,942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953,111 to 953,710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954,085 to 956,912 12310
Group Condition mRNA_3938 mRNA_3939 mRNA_3940 mRNA_3941 mRNA_3942
12306 12307 12308 12309 12310
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 N.D. N.D. -0.9
auxotrophy YNB Glucose -0.3 -0.4 N.D. N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.4 N.D. N.D. +0.1
auxotrophy Dropout Complete -0.5 +0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. N.D. -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 N.D. N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5 N.D. N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.2 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 N.D. N.D. +0.2
growth on oleic acid YNB Glucose -0.1 -0.4 N.D. N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 N.D. N.D. +0.4
growth on ypd YPD -0.4 +0.1 N.D. N.D. +0.6
growth on ricinoleic acid YNB Glucose -0.5 -0.3 N.D. N.D. +1.0
growth on oleic acid YNB Oleic Acid -0.1 -0.3 N.D. N.D. +0.8
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 N.D. N.D. +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.6 N.D. N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.0 N.D. N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.4 N.D. N.D. +0.3
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