Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12307 and 12308 are separated by 429 nucleotides12308 and 12309 are separated by 168 nucleotides12309 and 12310 are separated by 374 nucleotides12310 and 12311 are separated by 134 nucleotides mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950,019 to 951,719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952,149 to 952,942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953,111 to 953,710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954,085 to 956,912 12310 mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957,047 to 960,564 12311
Group Condition mRNA_3939 mRNA_3940 mRNA_3941 mRNA_3942 mRNA_3943
12307 12308 12309 12310 12311
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. N.D. -0.9 N.D.
auxotrophy YNB Glucose -0.4 N.D. N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. +0.0 N.D.
auxotrophy Dropout Complete +0.1 N.D. N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. N.D. +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 N.D. N.D. +0.6 N.D.
growth on oleic acid YNB Glucose -0.4 N.D. N.D. +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. N.D. +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 N.D. N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.3 N.D. N.D. +0.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. N.D. +0.5 N.D.
growth on ypd YPD +0.1 N.D. N.D. +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. N.D. +0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. +1.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 N.D. N.D. +0.3 N.D.
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