Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12308 and 12309 are separated by 168 nucleotides12309 and 12310 are separated by 374 nucleotides12310 and 12311 are separated by 134 nucleotides12311 and 12312 are separated by 441 nucleotides mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952,149 to 952,942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953,111 to 953,710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954,085 to 956,912 12310 mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957,047 to 960,564 12311 mRNA_3944: 12312 - BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba..., at 961,006 to 963,369 12312
Group Condition mRNA_3940 mRNA_3941 mRNA_3942 mRNA_3943 mRNA_3944
12308 12309 12310 12311 12312
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.9 N.D. -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.2 N.D. -1.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.0 N.D. -1.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.6 N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.1 N.D. -0.7
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.4 N.D. -0.2
auxotrophy Dropout Complete N.D. N.D. -0.1 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.5 N.D. -0.9
growth on ypd YPD N.D. N.D. +0.6 N.D. -0.9
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.2 N.D. -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 N.D. -0.6
auxotrophy YNB Glucose N.D. N.D. -0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.3 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.4 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.4 N.D. +0.5
growth on oleic acid YNB Glucose N.D. N.D. +0.6 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.1 N.D. +1.0
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.8 N.D. +0.4
growth on ricinoleic acid YNB Glucose N.D. N.D. +1.0 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.6 N.D. +0.8
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