Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12311 and 12312 are separated by 441 nucleotides12312 and 12313 are separated by 329 nucleotides12313 and 12314 are separated by 213 nucleotides12314 and 12315 are separated by 123 nucleotides mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957,047 to 960,564 12311 mRNA_3944: 12312 - BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba..., at 961,006 to 963,369 12312 mRNA_3945: 12313 - HMMPfam-Protein of unknown function (DUF2422)-PF10337, at 963,699 to 967,662 12313 mRNA_3946: 12314 - K06176 truD, PUS7 tRNA pseudouridine13 synthase, at 967,876 to 970,743 12314 mRNA_3947: 12315 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 970,867 to 972,281 12315
Group Condition mRNA_3943 mRNA_3944 mRNA_3945 mRNA_3946 mRNA_3947
12311 12312 12313 12314 12315
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.0 +0.1 -2.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.9 -0.2 -1.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.0 -0.1 -1.3 +0.5
growth on ypd YPD N.D. -0.9 -0.1 -0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.6 +0.3 -1.1 -0.1
growth on oleic acid YNB Glucose N.D. +0.4 -0.3 -1.1 -0.3
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.1 -1.4 -0.2
auxotrophy Dropout Complete N.D. -0.3 +0.0 -1.0 +0.1
auxotrophy YNB Glucose N.D. -0.2 +0.2 -0.9 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.2 -0.6 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 +0.0 -0.6 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.8 +0.2 -1.3 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -1.0 +0.3 -0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.0 -0.1 -1.9 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.7 +0.1 -0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.4 +0.3 -0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.0 -0.3 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.4 +0.0 -0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.1 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 +0.4 -0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 +0.5 +0.3 +0.4
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