Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12312 and 12313 are separated by 329 nucleotides12313 and 12314 are separated by 213 nucleotides12314 and 12315 are separated by 123 nucleotides12315 and 12316 are separated by 119 nucleotides mRNA_3944: 12312 - BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba..., at 961,006 to 963,369 12312 mRNA_3945: 12313 - HMMPfam-Protein of unknown function (DUF2422)-PF10337, at 963,699 to 967,662 12313 mRNA_3946: 12314 - K06176 truD, PUS7 tRNA pseudouridine13 synthase, at 967,876 to 970,743 12314 mRNA_3947: 12315 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 970,867 to 972,281 12315 mRNA_3948: 12316 - Hypothetical Protein, at 972,401 to 974,517 12316
Group Condition mRNA_3944 mRNA_3945 mRNA_3946 mRNA_3947 mRNA_3948
12312 12313 12314 12315 12316
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.2 -1.2 +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.1 -2.1 +0.1 +1.1
growth on ypd YPD -0.9 -0.1 -0.4 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.1 -1.3 +0.5 +0.5
growth on oleic acid YNB Glucose +0.4 -0.3 -1.1 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.3 -1.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.0 -0.6 +0.4 -0.3
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -1.4 -0.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 +0.2 -1.3 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 +0.1 -0.2 +0.3 +0.0
auxotrophy Dropout Complete -0.3 +0.0 -1.0 +0.1 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 +0.3 -0.2 +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.3 -0.3 -0.2 +0.1
auxotrophy YNB Glucose -0.2 +0.2 -0.9 -0.1 +0.7
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.2 -0.6 -0.2 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 -0.1 -1.9 +0.4 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 -0.3 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 -0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.4 -0.2 +0.2 -0.9
growth on oleic acid YNB Oleic Acid +0.4 +0.0 -0.6 -0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.5 +0.3 +0.4 -0.5
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