Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12316 and 12317 are separated by 434 nucleotides12317 and 12318 are separated by 360 nucleotides12318 and 12319 are separated by 979 nucleotides12319 and 12320 are separated by 85 nucleotides mRNA_3948: 12316 - Hypothetical Protein, at 972,401 to 974,517 12316 mRNA_3949: 12317 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 974,952 to 977,086 12317 mRNA_3950: 12318 - K03456 PPP2R1 serine/threonine-protein phosphatase 2A regulatory subunit A, at 977,447 to 979,479 12318 mRNA_3951: 12319 - K02967 RP-S2, MRPS2, rpsB small subunit ribosomal protein S2, at 980,459 to 981,716 12319 mRNA_3952: 12320 - KOG1018 Cytosine deaminase FCY1 and related enzymes, at 981,802 to 983,195 12320
Group Condition mRNA_3948 mRNA_3949 mRNA_3950 mRNA_3951 mRNA_3952
12316 12317 12318 12319 12320
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -1.2 N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 N.D. N.D. -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.2 N.D. N.D. -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.8 N.D. N.D. -0.2
growth on ypd YPD -0.1 -0.4 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +1.1 -0.6 N.D. N.D. -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 +0.3 N.D. N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.4 N.D. N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.1 N.D. N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.5 N.D. N.D. +0.4
growth on oleic acid YNB Glucose +0.1 +0.2 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 N.D. N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.5 -0.3 N.D. N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.3 +0.2 N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 N.D. N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 N.D. N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.6 N.D. N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.4 N.D. N.D. +0.3
auxotrophy YNB Glucose +0.7 +0.5 N.D. N.D. +0.2
auxotrophy Dropout Complete +0.8 +0.5 N.D. N.D. +0.3
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