Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12324 and 12325 are separated by 884 nucleotides
12325 and 12326 are separated by 140 nucleotides
12326 and 12327 are separated by 648 nucleotides
12327 and 12328 are separated by 526 nucleotides
mRNA_3956: 12324 - KOG1843 Uncharacterized conserved protein, at 991,807 to 993,961
12324
mRNA_3957: 12325 - KOG0254 Predicted transporter (major facilitator superfamily), at 994,846 to 997,069
12325
mRNA_3958: 12326 - Hypothetical Protein, at 997,210 to 999,982
12326
mRNA_3959: 12327 - K10401 KIF18_19 kinesin family member 18/19, at 1,000,631 to 1,004,153
12327
mRNA_3960: 12328 - K14284 NXF, TAP, MEX67 nuclear RNA export factor, at 1,004,680 to 1,007,202
12328
Group
Condition
mRNA
_3956
mRNA
_3957
mRNA
_3958
mRNA
_3959
mRNA
_3960
12324
12325
12326
12327
12328
growth on ypd
YPD
-1.0
-0.1
-0.3
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
-1.8
-0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.8
-0.1
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.7
-0.3
+0.1
-0.1
N.D.
auxotrophy
Dropout Complete
-0.4
-0.3
-0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
-0.9
-0.0
-0.3
N.D.
auxotrophy
YNB Glucose
-0.4
-0.2
+0.0
-0.2
N.D.
growth on oleic acid
YNB Glucose
-0.2
-0.1
+0.0
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
+0.1
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.5
+0.1
-0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.0
+0.1
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.5
+0.2
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.4
-0.0
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
+0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.3
-1.5
+0.1
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
+0.1
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.2
+0.4
-0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
+0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.5
-1.0
+0.0
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.5
-0.6
-0.0
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
+0.0
+0.6
+0.1
N.D.
remove
mRNA_3956
plot
remove
mRNA_3957
plot
remove
mRNA_3958
remove
mRNA_3959
plot
remove
mRNA_3960
plot