Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12325 and 12326 are separated by 140 nucleotides12326 and 12327 are separated by 648 nucleotides12327 and 12328 are separated by 526 nucleotides12328 and 12329 are separated by 1049 nucleotides mRNA_3957: 12325 - KOG0254 Predicted transporter (major facilitator superfamily), at 994,846 to 997,069 12325 mRNA_3958: 12326 - Hypothetical Protein, at 997,210 to 999,982 12326 mRNA_3959: 12327 - K10401 KIF18_19 kinesin family member 18/19, at 1,000,631 to 1,004,153 12327 mRNA_3960: 12328 - K14284 NXF, TAP, MEX67 nuclear RNA export factor, at 1,004,680 to 1,007,202 12328 mRNA_3961: 12329 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1,008,252 to 1,011,828 12329
Group Condition mRNA_3957 mRNA_3958 mRNA_3959 mRNA_3960 mRNA_3961
12325 12326 12327 12328 12329
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.8 -0.1 -0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.1 -0.4 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.0 +0.1 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.5 +0.1 +0.1 N.D. +0.1
auxotrophy Dropout Complete -0.3 -0.1 -0.2 N.D. -0.2
growth on ypd YPD -0.1 -0.3 -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 +0.0 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.1 -0.1 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.0 -0.3 N.D. +0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 -0.1 N.D. -0.3
auxotrophy YNB Glucose -0.2 +0.0 -0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 -0.1 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 -0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.0 N.D. -0.4
growth on ricinoleic acid YNB Glucose -0.4 -0.0 +0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 -0.0 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.2 +0.3 N.D. +0.0
growth on oleic acid YNB Glucose -0.1 +0.0 -0.1 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 +0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.1 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.6 +0.1 N.D. +0.4
remove
mRNA_3957
plot
remove
mRNA_3958
plot
remove
mRNA_3959
remove
mRNA_3960
plot
remove
mRNA_3961
plot