Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12328 and 12329 are separated by 1049 nucleotides12329 and 12330 are separated by 240 nucleotides12330 and 12331 are separated by 67 nucleotides12331 and 12332 are separated by 102 nucleotides mRNA_3960: 12328 - K14284 NXF, TAP, MEX67 nuclear RNA export factor, at 1,004,680 to 1,007,202 12328 mRNA_3961: 12329 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1,008,252 to 1,011,828 12329 mRNA_3962: 12330 - K09647 IMP1 mitochondrial inner membrane protease subunit 1, at 1,012,069 to 1,012,859 12330 mRNA_3963: 12331 - HMMPfam-Domain of unknown function (DUF4504)-PF14953, at 1,012,927 to 1,013,924 12331 mRNA_3964: 12332 - Hypothetical Protein, at 1,014,027 to 1,014,928 12332
Group Condition mRNA_3960 mRNA_3961 mRNA_3962 mRNA_3963 mRNA_3964
12328 12329 12330 12331 12332
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 N.D. -1.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.8 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 N.D. +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 N.D. -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.7 N.D. +0.3 +0.3
auxotrophy YNB Glucose N.D. -0.1 N.D. -0.2 +0.2
auxotrophy Dropout Complete N.D. -0.2 N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 N.D. -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 N.D. +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.4 +0.3
growth on ypd YPD N.D. -0.1 N.D. +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 N.D. -0.2 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.3 N.D. -0.3 +0.2
growth on oleic acid YNB Glucose N.D. +0.3 N.D. -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.5 N.D. -0.5 +0.5
growth on ricinoleic acid YNB Glucose N.D. +0.1 N.D. -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 N.D. +0.3 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.8 N.D. -0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 N.D. +0.4 +0.1
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