Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12329 and 12330 are separated by 240 nucleotides12330 and 12331 are separated by 67 nucleotides12331 and 12332 are separated by 102 nucleotides12332 and 12333 are separated by 786 nucleotides mRNA_3961: 12329 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1,008,252 to 1,011,828 12329 mRNA_3962: 12330 - K09647 IMP1 mitochondrial inner membrane protease subunit 1, at 1,012,069 to 1,012,859 12330 mRNA_3963: 12331 - HMMPfam-Domain of unknown function (DUF4504)-PF14953, at 1,012,927 to 1,013,924 12331 mRNA_3964: 12332 - Hypothetical Protein, at 1,014,027 to 1,014,928 12332 mRNA_3965: 12333 - Hypothetical Protein, at 1,015,715 to 1,016,506 12333
Group Condition mRNA_3961 mRNA_3962 mRNA_3963 mRNA_3964 mRNA_3965
12329 12330 12331 12332 12333
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. -1.1 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.8 N.D. -0.1 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.0 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. +0.1 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.2 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 N.D. +0.3 +0.3 -0.1
auxotrophy YNB Glucose -0.1 N.D. -0.2 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.2 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.4 +0.3 -0.2
auxotrophy Dropout Complete -0.2 N.D. -0.2 +0.3 +0.1
growth on ypd YPD -0.1 N.D. +0.1 +0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.1 +0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. -0.2 -0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.3 +0.2 +0.1
growth on oleic acid YNB Glucose +0.3 N.D. -0.0 -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. -0.5 +0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. -0.4 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.4 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.3 +0.3 +0.2
remove
mRNA_3961
plot
remove
mRNA_3962
plot
remove
mRNA_3963
remove
mRNA_3964
plot
remove
mRNA_3965
plot