Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12334 and 12335 are separated by 475 nucleotides12335 and 12336 are separated by 139 nucleotides12336 and 12337 are separated by 835 nucleotides12337 and 12338 are separated by 187 nucleotides mRNA_3966: 12334 - KOG2157 Predicted tubulin-tyrosine ligase, at 1,016,759 to 1,018,391 12334 mRNA_3967: 12335 - KOG1972 Uncharacterized conserved protein, at 1,018,867 to 1,022,845 12335 mRNA_3968: 12336 - HMMPfam-Thaumatin family-PF00314,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 1,022,985 to 1,024,769 12336 mRNA_3969: 12337 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 1,025,605 to 1,026,362 12337 mRNA_3970: 12338 - Hypothetical Protein, at 1,026,550 to 1,027,191 12338
Group Condition mRNA_3966 mRNA_3967 mRNA_3968 mRNA_3969 mRNA_3970
12334 12335 12336 12337 12338
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.2 -2.0 -0.6 +0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 -0.7 -0.6 +0.1
growth on ypd YPD +0.0 -0.3 -0.4 -0.4 -0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.4 -0.7 +0.5 -0.6
auxotrophy Dropout Complete +0.3 -0.3 -0.1 -0.6 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.7 -0.8 -0.1 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 +0.1 -1.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.7 -0.5 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 +0.5 -0.4 -0.3
auxotrophy YNB Glucose +0.1 -0.3 +0.5 -0.7 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 +0.2 -0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.7 -0.2 +0.6 -0.3
growth on oleic acid YNB Glucose +0.1 -0.2 -0.2 +0.4 -0.4
growth on oleic acid YNB Oleic Acid +0.2 -0.1 -0.1 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 +0.1 +0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.2 -0.4 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.2 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.4 -0.0 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 -0.4 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.2 +0.4 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 -0.2 +0.0 +0.5
remove
mRNA_3966
plot
remove
mRNA_3967
plot
remove
mRNA_3968
remove
mRNA_3969
plot
remove
mRNA_3970
plot