Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12338 and 12339 are separated by 661 nucleotides12339 and 12340 are separated by 598 nucleotides12340 and 12341 are separated by 870 nucleotides12341 and 12342 are separated by 31 nucleotides mRNA_3970: 12338 - Hypothetical Protein, at 1,026,550 to 1,027,191 12338 mRNA_3971: 12339 - K02964 RP-S18e, RPS18 small subunit ribosomal protein S18e, at 1,027,853 to 1,028,767 12339 mRNA_3972: 12340 - K11594 DDX3X, bel ATP-dependent RNA helicase DDX3X, at 1,029,366 to 1,031,642 12340 mRNA_3973: 12341 - HMMPfam-Flavin reductase like domain-PF01613,SMART-Flavin reductase like domain-SM00903,SUPERFAMILY--SSF50475, at 1,032,513 to 1,033,671 12341 mRNA_3974: 12342 - K02350 POLZ1, rev3 DNA polymerase zeta, at 1,033,703 to 1,040,837 12342
Group Condition mRNA_3970 mRNA_3971 mRNA_3972 mRNA_3973 mRNA_3974
12338 12339 12340 12341 12342
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. N.D. -0.7 +0.1
growth on oleic acid YNB Glucose -0.4 N.D. N.D. -0.0 -0.1
auxotrophy Dropout Complete -0.6 N.D. N.D. -0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.3 N.D. N.D. -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.6 N.D. N.D. +0.1 +0.1
growth on ypd YPD -0.2 N.D. N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. N.D. +0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. N.D. -0.7 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. N.D. +0.6 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. N.D. -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.5 N.D. N.D. -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.5 N.D. N.D. -0.2 -0.2
auxotrophy YNB Glucose +0.0 N.D. N.D. +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. N.D. +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. +0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.7 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 N.D. N.D. -0.5 +0.3
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