Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12342 and 12343 are separated by 725 nucleotides12343 and 12344 are separated by 400 nucleotides12344 and 12345 are separated by 234 nucleotides12345 and 12346 are separated by 133 nucleotides mRNA_3974: 12342 - K02350 POLZ1, rev3 DNA polymerase zeta, at 1,033,703 to 1,040,837 12342 mRNA_3975: 12343 - KOG1938 Protein with predicted involvement in meiosis (GSG1), at 1,041,563 to 1,046,675 12343 mRNA_3976: 12344 - K20473 NBAS neuroblastoma-amplified sequence, at 1,047,076 to 1,050,963 12344 mRNA_3977: 12345 - KOG4689 Predicted RNase, at 1,051,198 to 1,052,896 12345 mRNA_3978: 12346 - Hypothetical Protein, at 1,053,030 to 1,054,389 12346
Group Condition mRNA_3974 mRNA_3975 mRNA_3976 mRNA_3977 mRNA_3978
12342 12343 12344 12345 12346
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 N.D. -0.1 +0.1
growth on ypd YPD -0.3 +0.6 N.D. -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 N.D. -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 N.D. +0.4 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.5 N.D. +0.2 -0.8
growth on oleic acid YNB Glucose -0.1 -0.1 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.3 N.D. -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.0 N.D. +0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.9 N.D. -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.5 N.D. +0.2 -0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.3 N.D. +0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.9 N.D. -0.2 +0.2
auxotrophy Dropout Complete +0.1 +0.6 N.D. -0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.7 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.8 N.D. -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.6 N.D. +0.0 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.6 N.D. +0.2 +0.5
auxotrophy YNB Glucose +0.0 +0.6 N.D. +0.1 +0.7
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.6 N.D. +0.2 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.6 N.D. +0.5 +0.5
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