Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12343 and 12344 are separated by 400 nucleotides12344 and 12345 are separated by 234 nucleotides12345 and 12346 are separated by 133 nucleotides12346 and 12347 are separated by 353 nucleotides mRNA_3975: 12343 - KOG1938 Protein with predicted involvement in meiosis (GSG1), at 1,041,563 to 1,046,675 12343 mRNA_3976: 12344 - K20473 NBAS neuroblastoma-amplified sequence, at 1,047,076 to 1,050,963 12344 mRNA_3977: 12345 - KOG4689 Predicted RNase, at 1,051,198 to 1,052,896 12345 mRNA_3978: 12346 - Hypothetical Protein, at 1,053,030 to 1,054,389 12346 mRNA_3979: 12347 - K07119 K07119 uncharacterized protein, at 1,054,743 to 1,056,048 12347
Group Condition mRNA_3975 mRNA_3976 mRNA_3977 mRNA_3978 mRNA_3979
12343 12344 12345 12346 12347
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. +0.2 -0.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.4 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. -0.1 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.0 -0.1 N.D.
growth on ypd YPD +0.6 N.D. -0.0 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.2 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. +0.2 +0.1 N.D.
growth on oleic acid YNB Glucose -0.1 N.D. +0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.0 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 N.D. +0.2 -0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.9 N.D. -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.3 N.D. +0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 N.D. -0.0 +0.1 N.D.
auxotrophy Dropout Complete +0.6 N.D. -0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 N.D. -0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.6 N.D. +0.0 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 N.D. -0.1 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 N.D. +0.2 +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.6 N.D. +0.2 +0.5 N.D.
auxotrophy YNB Glucose +0.6 N.D. +0.1 +0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. +0.5 +0.5 N.D.
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