Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12344 and 12345 are separated by 234 nucleotides12345 and 12346 are separated by 133 nucleotides12346 and 12347 are separated by 353 nucleotides12347 and 12348 are separated by 335 nucleotides mRNA_3976: 12344 - K20473 NBAS neuroblastoma-amplified sequence, at 1,047,076 to 1,050,963 12344 mRNA_3977: 12345 - KOG4689 Predicted RNase, at 1,051,198 to 1,052,896 12345 mRNA_3978: 12346 - Hypothetical Protein, at 1,053,030 to 1,054,389 12346 mRNA_3979: 12347 - K07119 K07119 uncharacterized protein, at 1,054,743 to 1,056,048 12347 mRNA_3980: 12348 - KOG1196 Predicted NAD-dependent oxidoreductase, at 1,056,384 to 1,057,964 12348
Group Condition mRNA_3976 mRNA_3977 mRNA_3978 mRNA_3979 mRNA_3980
12344 12345 12346 12347 12348
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.2 N.D. -0.6
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.8 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +0.2 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 +0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.1 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 +0.5 N.D. -0.9
growth on oleic acid YNB Glucose N.D. +0.2 +0.1 N.D. -0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.1 N.D. -0.1
growth on ypd YPD N.D. -0.0 -0.4 N.D. +0.4
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.5 N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.0 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.2 N.D. -0.1
auxotrophy Dropout Complete N.D. -0.1 +0.4 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.1 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 +0.5 N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 -0.4 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 +0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.3 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.5 N.D. +0.0
auxotrophy YNB Glucose N.D. +0.1 +0.7 N.D. +0.1
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