Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12345 and 12346 are separated by 133 nucleotides12346 and 12347 are separated by 353 nucleotides12347 and 12348 are separated by 335 nucleotides12348 and 12349 are separated by 293 nucleotides mRNA_3977: 12345 - KOG4689 Predicted RNase, at 1,051,198 to 1,052,896 12345 mRNA_3978: 12346 - Hypothetical Protein, at 1,053,030 to 1,054,389 12346 mRNA_3979: 12347 - K07119 K07119 uncharacterized protein, at 1,054,743 to 1,056,048 12347 mRNA_3980: 12348 - KOG1196 Predicted NAD-dependent oxidoreductase, at 1,056,384 to 1,057,964 12348 mRNA_3981: 12349 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 1,058,258 to 1,059,791 12349
Group Condition mRNA_3977 mRNA_3978 mRNA_3979 mRNA_3980 mRNA_3981
12345 12346 12347 12348 12349
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.8 N.D. +0.2 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 N.D. -0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.5 N.D. -0.9 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.2 N.D. -0.6 +0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.1 N.D. -0.5 +0.0
growth on oleic acid YNB Glucose +0.2 +0.1 N.D. -0.6 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 N.D. -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.5 N.D. -0.6 -0.5
growth on ricinoleic acid YNB Glucose +0.1 +0.5 N.D. -0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.4 +0.3
growth on ypd YPD -0.0 -0.4 N.D. +0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.4 N.D. +0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 N.D. -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.5 N.D. +0.0 -0.6
auxotrophy Dropout Complete -0.1 +0.4 N.D. -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 N.D. -0.4 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 N.D. +0.2 -0.1
auxotrophy YNB Glucose +0.1 +0.7 N.D. +0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.4 N.D. +0.4 +0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 N.D. -0.0 +1.0
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