Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12347 and 12348 are separated by 335 nucleotides12348 and 12349 are separated by 293 nucleotides12349 and 12350 are separated by 165 nucleotides12350 and 12351 are separated by 466 nucleotides mRNA_3979: 12347 - K07119 K07119 uncharacterized protein, at 1,054,743 to 1,056,048 12347 mRNA_3980: 12348 - KOG1196 Predicted NAD-dependent oxidoreductase, at 1,056,384 to 1,057,964 12348 mRNA_3981: 12349 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 1,058,258 to 1,059,791 12349 mRNA_3982: 12350 - K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C, at 1,059,957 to 1,071,266 12350 mRNA_3983: 12351 - HMMPfam-Mpv17 / PMP22 family-PF04117, at 1,071,733 to 1,072,892 12351
Group Condition mRNA_3979 mRNA_3980 mRNA_3981 mRNA_3982 mRNA_3983
12347 12348 12349 12350 12351
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.9 -0.4 N.D. -0.3
growth on oleic acid YNB Glucose N.D. -0.6 -0.4 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -1.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 -0.4 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.6 N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.6 -0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 +0.0 N.D. -0.2
auxotrophy YNB Glucose N.D. +0.1 -0.6 N.D. -0.3
growth on ricinoleic acid YNB Glucose N.D. -0.5 -0.2 N.D. +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.5 +0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 -0.4 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.4 N.D. +0.2
auxotrophy Dropout Complete N.D. -0.1 -0.0 N.D. -0.0
growth on ypd YPD N.D. +0.4 +0.0 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.3 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.0 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.1 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 +0.7 N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +1.0 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 +0.8 N.D. +0.4
remove
mRNA_3979
plot		 remove
mRNA_3980
plot		 remove
mRNA_3981		 remove
mRNA_3982
plot		 remove
mRNA_3983
plot