Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12349 and 12350 are separated by 165 nucleotides12350 and 12351 are separated by 466 nucleotides12351 and 12352 are separated by 1020 nucleotides12352 and 12353 are separated by 727 nucleotides mRNA_3981: 12349 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 1,058,258 to 1,059,791 12349 mRNA_3982: 12350 - K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C, at 1,059,957 to 1,071,266 12350 mRNA_3983: 12351 - HMMPfam-Mpv17 / PMP22 family-PF04117, at 1,071,733 to 1,072,892 12351 mRNA_3984: 12352 - Hypothetical Protein, at 1,073,913 to 1,075,521 12352 mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1,076,249 to 1,078,580 12353
Group Condition mRNA_3981 mRNA_3982 mRNA_3983 mRNA_3984 mRNA_3985
12349 12350 12351 12352 12353
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 N.D. -0.4 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. -0.5 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. -0.3 -0.3 N.D.
auxotrophy YNB Glucose -0.6 N.D. -0.3 -0.2 N.D.
growth on oleic acid YNB Glucose -0.4 N.D. -0.4 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. -0.3 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. +0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. -0.2 -0.3 N.D.
growth on ypd YPD +0.0 N.D. -0.5 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.3 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.2 -0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. +0.2 -0.1 N.D.
auxotrophy Dropout Complete -0.0 N.D. -0.0 -0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.0 N.D. -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.1 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.4 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.8 N.D. +0.4 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +1.0 N.D. +0.3 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.1 +0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 N.D. +0.4 +0.1 N.D.
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