Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12350 and 12351 are separated by 466 nucleotides12351 and 12352 are separated by 1020 nucleotides12352 and 12353 are separated by 727 nucleotides12353 and 12354 are separated by 285 nucleotides mRNA_3982: 12350 - K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C, at 1,059,957 to 1,071,266 12350 mRNA_3983: 12351 - HMMPfam-Mpv17 / PMP22 family-PF04117, at 1,071,733 to 1,072,892 12351 mRNA_3984: 12352 - Hypothetical Protein, at 1,073,913 to 1,075,521 12352 mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1,076,249 to 1,078,580 12353 mRNA_3986: 12354 - K01439 dapE succinyl-diaminopimelate desuccinylase, at 1,078,866 to 1,080,824 12354
Group Condition mRNA_3982 mRNA_3983 mRNA_3984 mRNA_3985 mRNA_3986
12350 12351 12352 12353 12354
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 -0.3 N.D. -0.6
growth on oleic acid YNB Glucose N.D. -0.4 -0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 -0.3 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.3 N.D. -0.2
growth on ypd YPD N.D. -0.5 +0.1 N.D. -0.1
auxotrophy Dropout Complete N.D. -0.0 -0.2 N.D. -0.4
auxotrophy YNB Glucose N.D. -0.3 -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.6 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.1 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.3 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.6 N.D. -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.1 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 -0.3 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.3 -0.4 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 +0.1 N.D. -0.4
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.0 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 -0.4 N.D. +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -0.2 N.D. +1.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.3 N.D. +0.7
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 -0.1 N.D. +0.3
remove
mRNA_3982
plot		 remove
mRNA_3983
plot		 remove
mRNA_3984		 remove
mRNA_3985
plot		 remove
mRNA_3986
plot