Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12352 and 12353 are separated by 727 nucleotides12353 and 12354 are separated by 285 nucleotides12354 and 12355 are separated by 1156 nucleotides12355 and 12356 are separated by 1972 nucleotides mRNA_3984: 12352 - Hypothetical Protein, at 1,073,913 to 1,075,521 12352 mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1,076,249 to 1,078,580 12353 mRNA_3986: 12354 - K01439 dapE succinyl-diaminopimelate desuccinylase, at 1,078,866 to 1,080,824 12354 mRNA_3987: 12355 - K08576 CAPN7 calpain-7, at 1,081,981 to 1,082,833 12355 mRNA_3988: 12356 - Hypothetical Protein, at 1,084,806 to 1,085,290 12356
Group Condition mRNA_3984 mRNA_3985 mRNA_3986 mRNA_3987 mRNA_3988
12352 12353 12354 12355 12356
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -0.6 -1.2 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 N.D. -0.1 -1.3 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.4 +0.4 -2.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. +0.1 -0.3 -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.0 +0.1 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +1.1 -0.1 -2.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. +0.7 +0.7 -1.9
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.3 -0.3 -0.4
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.2 +0.8 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.3 -0.3 +0.1
growth on oleic acid YNB Glucose -0.2 N.D. -0.1 +0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 N.D. -0.9 +0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +0.4 +1.3 -1.0
growth on ypd YPD +0.1 N.D. -0.1 +0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. +0.4 +0.2 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.2 +0.6
growth on ricinoleic acid YNB Glucose -0.0 N.D. +0.3 +1.1 +0.7
auxotrophy Dropout Complete -0.2 N.D. -0.4 +1.0 +1.8
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.2 +0.7 +2.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.1 +0.9 +1.9
auxotrophy YNB Glucose -0.2 N.D. -0.1 +0.6 +2.4
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