Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12353 and 12354 are separated by 285 nucleotides12354 and 12355 are separated by 1156 nucleotides12355 and 12356 are separated by 1972 nucleotides12356 and 12357 are separated by 343 nucleotides mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1,076,249 to 1,078,580 12353 mRNA_3986: 12354 - K01439 dapE succinyl-diaminopimelate desuccinylase, at 1,078,866 to 1,080,824 12354 mRNA_3987: 12355 - K08576 CAPN7 calpain-7, at 1,081,981 to 1,082,833 12355 mRNA_3988: 12356 - Hypothetical Protein, at 1,084,806 to 1,085,290 12356 mRNA_3989: 12357 - BLAST Ribonucleases P/MRP protein subunit pop3 [Hypsizygus ..., at 1,085,634 to 1,087,441 12357
Group Condition mRNA_3985 mRNA_3986 mRNA_3987 mRNA_3988 mRNA_3989
12353 12354 12355 12356 12357
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 -1.2 -1.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 +0.4 -2.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -1.3 -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.3 -1.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.1 -1.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +1.1 -0.1 -2.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.7 +0.7 -1.9 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 -0.3 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.9 +0.4 +0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.8 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.3 +0.1 N.D.
growth on oleic acid YNB Glucose N.D. -0.1 +0.6 -0.2 N.D.
growth on ypd YPD N.D. -0.1 +0.5 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 +1.3 -1.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.2 +0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 +0.2 +0.4 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.3 +1.1 +0.7 N.D.
auxotrophy Dropout Complete N.D. -0.4 +1.0 +1.8 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.7 +2.2 N.D.
auxotrophy YNB Glucose N.D. -0.1 +0.6 +2.4 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.9 +1.9 N.D.
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