Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12355 and 12356 are separated by 1972 nucleotides12356 and 12357 are separated by 343 nucleotides12357 and 12358 are separated by 125 nucleotides12358 and 12359 are separated by 197 nucleotides mRNA_3987: 12355 - K08576 CAPN7 calpain-7, at 1,081,981 to 1,082,833 12355 mRNA_3988: 12356 - Hypothetical Protein, at 1,084,806 to 1,085,290 12356 mRNA_3989: 12357 - BLAST Ribonucleases P/MRP protein subunit pop3 [Hypsizygus ..., at 1,085,634 to 1,087,441 12357 mRNA_3990: 12358 - K07561 DPH1, dph2 2-(3-amino-3-carboxypropyl)histidine synthase, at 1,087,567 to 1,089,527 12358 mRNA_3991: 12359 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,089,725 to 1,094,754 12359
Group Condition mRNA_3987 mRNA_3988 mRNA_3989 mRNA_3990 mRNA_3991
12355 12356 12357 12358 12359
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -2.2 N.D. -1.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.2 -1.1 N.D. +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 -1.2 N.D. -0.7 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.3 -0.7 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -1.9 N.D. -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -2.1 N.D. +0.3 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -1.3 N.D. -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.4 N.D. +0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.1 N.D. +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +1.3 -1.0 N.D. -0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.8 -0.8 N.D. -0.2 +0.2
growth on oleic acid YNB Glucose +0.6 -0.2 N.D. -0.6 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.4 N.D. -0.4 -0.0
growth on ypd YPD +0.5 -0.1 N.D. -0.5 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.2 N.D. -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.6 N.D. +0.0 +0.2
growth on ricinoleic acid YNB Glucose +1.1 +0.7 N.D. -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.9 +1.9 N.D. -0.1 +0.2
auxotrophy Dropout Complete +1.0 +1.8 N.D. +0.3 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.7 +2.2 N.D. +0.3 +0.3
auxotrophy YNB Glucose +0.6 +2.4 N.D. +0.6 +0.3
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