Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12356 and 12357 are separated by 343 nucleotides12357 and 12358 are separated by 125 nucleotides12358 and 12359 are separated by 197 nucleotides12359 and 12360 are separated by 921 nucleotides mRNA_3988: 12356 - Hypothetical Protein, at 1,084,806 to 1,085,290 12356 mRNA_3989: 12357 - BLAST Ribonucleases P/MRP protein subunit pop3 [Hypsizygus ..., at 1,085,634 to 1,087,441 12357 mRNA_3990: 12358 - K07561 DPH1, dph2 2-(3-amino-3-carboxypropyl)histidine synthase, at 1,087,567 to 1,089,527 12358 mRNA_3991: 12359 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,089,725 to 1,094,754 12359 mRNA_3992: 12360 - KOG0627 Heat shock transcription factor, at 1,095,676 to 1,096,761 12360
Group Condition mRNA_3988 mRNA_3989 mRNA_3990 mRNA_3991 mRNA_3992
12356 12357 12358 12359 12360
facs on lipid accumulation Sorted Low BODIPY Gate -2.2 N.D. -1.1 +0.4 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -2.1 N.D. +0.3 +0.6 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 N.D. -0.3 +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -1.2 N.D. -0.7 +0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -1.3 N.D. -0.0 +0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 N.D. -0.3 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.1 N.D. +0.0 -0.0 +0.0
growth on oleic acid YNB Oleic Acid -0.8 N.D. -0.2 +0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. -0.4 -0.0 -0.5
growth on oleic acid YNB Glucose -0.2 N.D. -0.6 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 N.D. +0.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.0 +0.1 -0.5
growth on ypd YPD -0.1 N.D. -0.5 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. +0.3 +0.3 +0.1
growth on ricinoleic acid YNB Glucose +0.7 N.D. -0.3 +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 N.D. +0.0 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +1.9 N.D. -0.1 +0.2 -0.1
auxotrophy Dropout Complete +1.8 N.D. +0.3 +0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine +2.2 N.D. +0.3 +0.3 +0.0
auxotrophy YNB Glucose +2.4 N.D. +0.6 +0.3 -0.1
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