Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12357 and 12358 are separated by 125 nucleotides12358 and 12359 are separated by 197 nucleotides12359 and 12360 are separated by 921 nucleotides12360 and 12361 are separated by 1535 nucleotides mRNA_3989: 12357 - BLAST Ribonucleases P/MRP protein subunit pop3 [Hypsizygus ..., at 1,085,634 to 1,087,441 12357 mRNA_3990: 12358 - K07561 DPH1, dph2 2-(3-amino-3-carboxypropyl)histidine synthase, at 1,087,567 to 1,089,527 12358 mRNA_3991: 12359 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,089,725 to 1,094,754 12359 mRNA_3992: 12360 - KOG0627 Heat shock transcription factor, at 1,095,676 to 1,096,761 12360 mRNA_3993: 12361 - KOG0627 Heat shock transcription factor, at 1,098,297 to 1,099,754 12361
Group Condition mRNA_3989 mRNA_3990 mRNA_3991 mRNA_3992 mRNA_3993
12357 12358 12359 12360 12361
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.0 -0.5 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.7 +0.1 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.1 -0.5 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.1 -0.3 +0.1
growth on ypd YPD N.D. -0.5 +0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.0 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.1 +0.4 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.1 +0.1 +0.0
growth on oleic acid YNB Glucose N.D. -0.6 +0.2 +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.2 +0.1 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.1 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.1 +0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.1 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.1 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.2 -0.1 +0.3
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.2 +0.0 +0.4
auxotrophy Dropout Complete N.D. +0.3 +0.4 -0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 +0.6 -0.7 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +0.3 +0.1 +0.0
auxotrophy YNB Glucose N.D. +0.6 +0.3 -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.3 +0.0 +0.6
remove
mRNA_3989
plot
remove
mRNA_3990
plot
remove
mRNA_3991
remove
mRNA_3992
plot
remove
mRNA_3993
plot