Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12358 and 12359 are separated by 197 nucleotides12359 and 12360 are separated by 921 nucleotides12360 and 12361 are separated by 1535 nucleotides12361 and 12362 are separated by 601 nucleotides mRNA_3990: 12358 - K07561 DPH1, dph2 2-(3-amino-3-carboxypropyl)histidine synthase, at 1,087,567 to 1,089,527 12358 mRNA_3991: 12359 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,089,725 to 1,094,754 12359 mRNA_3992: 12360 - KOG0627 Heat shock transcription factor, at 1,095,676 to 1,096,761 12360 mRNA_3993: 12361 - KOG0627 Heat shock transcription factor, at 1,098,297 to 1,099,754 12361 mRNA_3994: 12362 - K11484 HOS3 histone deacetylase HOS3, at 1,100,356 to 1,102,987 12362
Group Condition mRNA_3990 mRNA_3991 mRNA_3992 mRNA_3993 mRNA_3994
12358 12359 12360 12361 12362
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.1 -0.5 -0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.7 +0.1 +0.0 +0.2 -0.1
growth on oleic acid YNB Glucose -0.6 +0.2 +0.1 +0.3 -0.5
growth on ricinoleic acid YNB Glucose -0.3 +0.1 +0.3 +0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 +0.1 +0.4 -0.5
growth on ypd YPD -0.5 +0.4 +0.1 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.1 +0.3 +0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 +0.4 +0.3 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +0.1 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 -0.3 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.0 +0.0 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 +0.1 -0.1 -0.1
auxotrophy Dropout Complete +0.3 +0.4 -0.3 +0.2 -0.5
growth on oleic acid YNB Oleic Acid -0.2 +0.2 +0.0 +0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 -0.1 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 +0.0 -0.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.6 -0.7 +0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.3 +0.1 +0.0 +0.0
auxotrophy YNB Glucose +0.6 +0.3 -0.1 +0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 +0.0 +0.6 -0.0
remove
mRNA_3990
plot
remove
mRNA_3991
plot
remove
mRNA_3992
remove
mRNA_3993
plot
remove
mRNA_3994
plot