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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12360 and 12361 are separated by 1535 nucleotides
12361 and 12362 are separated by 601 nucleotides
12362 and 12363 are separated by 110 nucleotides
12363 and 12364 are separated by 726 nucleotides
mRNA_3992: 12360 - KOG0627 Heat shock transcription factor, at 1,095,676 to 1,096,761
12360
mRNA_3993: 12361 - KOG0627 Heat shock transcription factor, at 1,098,297 to 1,099,754
12361
mRNA_3994: 12362 - K11484 HOS3 histone deacetylase HOS3, at 1,100,356 to 1,102,987
12362
mRNA_3995: 12363 - Hypothetical Protein, at 1,103,098 to 1,103,672
12363
mRNA_3996: 12364 - Hypothetical Protein, at 1,104,399 to 1,108,726
12364
Group
Condition
mRNA
_3992
mRNA
_3993
mRNA
_3994
mRNA
_3995
mRNA
_3996
12360
12361
12362
12363
12364
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.0
-0.5
N.D.
-0.4
auxotrophy
Dropout Complete
-0.3
+0.2
-0.5
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.4
-0.1
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.1
-0.1
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.0
-0.1
N.D.
-0.3
growth on ypd
YPD
+0.1
-0.1
-0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
-0.0
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.1
+0.0
N.D.
+0.2
auxotrophy
YNB Glucose
-0.1
+0.4
-0.1
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
+0.3
+0.1
-0.6
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.4
-0.5
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.1
+0.1
N.D.
+0.0
growth on oleic acid
YNB Glucose
+0.1
+0.3
-0.5
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.0
+0.2
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.2
-0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.2
-0.4
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.6
-0.0
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.4
-0.1
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
+0.0
+0.4
-0.1
N.D.
+0.4
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