Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12363 and 12364 are separated by 726 nucleotides12364 and 12365 are separated by 157 nucleotides12365 and 12366 are separated by 420 nucleotides12366 and 12367 are separated by 610 nucleotides mRNA_3995: 12363 - Hypothetical Protein, at 1,103,098 to 1,103,672 12363 mRNA_3996: 12364 - Hypothetical Protein, at 1,104,399 to 1,108,726 12364 mRNA_3997: 12365 - Hypothetical Protein, at 1,108,884 to 1,109,667 12365 mRNA_3998: 12366 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,110,088 to 1,111,091 12366 mRNA_3999: 12367 - KOG1341 Na+/K+ transporter, at 1,111,702 to 1,115,806 12367
Group Condition mRNA_3995 mRNA_3996 mRNA_3997 mRNA_3998 mRNA_3999
12363 12364 12365 12366 12367
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 N.D. N.D. -0.1
auxotrophy Dropout Complete N.D. -0.3 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose N.D. -0.1 N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 N.D. N.D. -0.2
growth on oleic acid YNB Glucose N.D. +0.2 N.D. N.D. -0.1
growth on ypd YPD N.D. -0.1 N.D. N.D. +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.4 N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.3 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 N.D. N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 N.D. N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 N.D. N.D. +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 N.D. N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 N.D. N.D. +0.4
remove
mRNA_3995
plot		 remove
mRNA_3996
plot		 remove
mRNA_3997		 remove
mRNA_3998
plot		 remove
mRNA_3999
plot