Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12366 and 12367 are separated by 610 nucleotides12367 and 12368 are separated by 1039 nucleotides12368 and 12369 are separated by 2237 nucleotides12369 and 12370 are separated by 1396 nucleotides mRNA_3998: 12366 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,110,088 to 1,111,091 12366 mRNA_3999: 12367 - KOG1341 Na+/K+ transporter, at 1,111,702 to 1,115,806 12367 mRNA_4000: 12368 - BLAST Myosin heavy chain, striated muscle [Argopecten irrad..., at 1,116,846 to 1,118,153 12368 mRNA_4001: 12369 - Hypothetical Protein, at 1,120,391 to 1,121,103 12369 mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1,122,500 to 1,123,489 12370
Group Condition mRNA_3998 mRNA_3999 mRNA_4000 mRNA_4001 mRNA_4002
12366 12367 12368 12369 12370
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 N.D. -0.9 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 N.D. -0.3 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 N.D. -0.3 N.D.
auxotrophy YNB Glucose N.D. +0.0 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose N.D. -0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 N.D. +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 N.D. -0.3 N.D.
auxotrophy Dropout Complete N.D. -0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 N.D. +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 N.D. +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 N.D. +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 N.D. +0.8 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.6 N.D. +0.5 N.D.
growth on ypd YPD N.D. +0.3 N.D. +0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 N.D. +1.5 N.D.
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