Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12367 and 12368 are separated by 1039 nucleotides12368 and 12369 are separated by 2237 nucleotides12369 and 12370 are separated by 1396 nucleotides12370 and 12371 are separated by 390 nucleotides mRNA_3999: 12367 - KOG1341 Na+/K+ transporter, at 1,111,702 to 1,115,806 12367 mRNA_4000: 12368 - BLAST Myosin heavy chain, striated muscle [Argopecten irrad..., at 1,116,846 to 1,118,153 12368 mRNA_4001: 12369 - Hypothetical Protein, at 1,120,391 to 1,121,103 12369 mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1,122,500 to 1,123,489 12370 mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1,123,880 to 1,126,136 12371
Group Condition mRNA_3999 mRNA_4000 mRNA_4001 mRNA_4002 mRNA_4003
12367 12368 12369 12370 12371
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.3 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.9 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.1 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.1 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.3 N.D. +0.2
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 N.D. +0.2
auxotrophy YNB Glucose +0.0 N.D. -0.1 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.3 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 N.D. -0.3 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.3 N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.3 N.D. +0.2
auxotrophy Dropout Complete -0.1 N.D. +0.2 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.6 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.2 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.8 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.7 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. +0.5 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +1.5 N.D. +0.1
growth on ypd YPD +0.3 N.D. +0.7 N.D. +0.3
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