Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12369 and 12370 are separated by 1396 nucleotides12370 and 12371 are separated by 390 nucleotides12371 and 12372 are separated by 831 nucleotides12372 and 12373 are separated by 581 nucleotides mRNA_4001: 12369 - Hypothetical Protein, at 1,120,391 to 1,121,103 12369 mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1,122,500 to 1,123,489 12370 mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1,123,880 to 1,126,136 12371 mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1,126,968 to 1,131,164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,131,746 to 1,132,749 12373
Group Condition mRNA_4001 mRNA_4002 mRNA_4003 mRNA_4004 mRNA_4005
12369 12370 12371 12372 12373
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 N.D. +0.2 -0.6 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.1 -0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.6 -2.4 +0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.2 -0.6 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +0.2 -1.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.0 -0.3 -0.4
growth on ricinoleic acid YNB Glucose -0.3 N.D. +0.2 -0.3 +0.5
auxotrophy YNB Glucose -0.1 N.D. +0.3 -0.4 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. -0.2 -0.1 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. -0.0 -1.0 +1.1
growth on oleic acid YNB Glucose +0.1 N.D. +0.2 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.5 -0.3 +0.4
growth on ypd YPD +0.7 N.D. +0.3 -0.3 +0.2
auxotrophy Dropout Complete +0.2 N.D. +0.4 -0.1 +0.6
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.2 -0.6 +1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 N.D. +0.3 -0.8 +1.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 N.D. +0.3 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 N.D. +0.2 -0.3 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.5 N.D. +0.3 -0.4 +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.5 N.D. +0.1 -0.3 +1.0
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